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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7599551 chr2:112973924 C/T RGPD5 chr2:110550335-110615272:+ -0.49 -6.84 2.37E-11 Box Plot
THCA rs7599557 chr2:101085332 T/C LOC285359 chr3:101431278-101432259:+ 0.36 6.85 2.31E-11 Box Plot
THCA rs7599565 chr2:101085339 T/C LOC285359 chr3:101431278-101432259:+ 0.36 6.85 2.31E-11 Box Plot
THCA rs7599594 chr2:132209430 A/G CCDC74B chr2:130896860-130902707:- 0.37 6.57 1.31E-10 Box Plot
THCA rs76001930 chr8:11789749 C/A SGK223 chr8:8175258-8244008:- -0.45 -8.45 3.6E-16 Box Plot
THCA rs7600333 chr2:144153457 T/C ZNF296 chr19:45574758-45579846:- 0.25 5.89 7.24E-9 Box Plot
THCA rs7600509 chr2:132276435 C/T CCDC74B chr2:130896860-130902707:- 0.4 7.14 3.39E-12 Box Plot
THCA rs7602900 chr2:132209512 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.5 2.03E-10 Box Plot
THCA rs7602968 chr2:101143934 G/A LOC285359 chr3:101431278-101432259:+ 0.34 6.41 3.42E-10 Box Plot
THCA rs7603061 chr2:33671003 C/T SMTNL2 chr17:4487294-4511614:+ -0.36 -6 3.8E-9 Box Plot
THCA rs7605662 chr2:101084897 G/A LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs7605741 chr2:132276412 A/G CCDC74B chr2:130896860-130902707:- 0.4 7.14 3.39E-12 Box Plot
THCA rs7606392 chr2:113267166 T/C RGPD5 chr2:110550335-110615272:+ -0.36 -6.32 6.03E-10 Box Plot
THCA rs7606473 chr2:101109680 A/G LOC285359 chr3:101431278-101432259:+ -0.3 -5.91 6.34E-9 Box Plot
THCA rs7608439 chr2:144155919 A/G ZNF296 chr19:45574758-45579846:- 0.26 6.14 1.71E-9 Box Plot